CDS

Accession Number TCMCG051C41560
gbkey CDS
Protein Id XP_006374349.2
Location join(6913936..6913948,6914049..6914140,6914343..6914444,6914536..6914609,6914715..6914795,6915439..6915499,6915613..6915662,6916316..6916370,6917268..6917345,6917462..6917515,6917719..6917772,6917851..6917911,6918622..6918673,6918790..6918856,6919605..6919667,6919771..6919833,6920064..6920126,6920637..6920701,6921387..6921455,6921642..6921687)
Gene LOC18105693
GeneID 18105693
Organism Populus trichocarpa

Protein

Length 420aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_006374287.2
Definition actin-related protein 4 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category Z
Description Belongs to the actin family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K11340        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04714        [VIEW IN KEGG]
ko05225        [VIEW IN KEGG]
map04714        [VIEW IN KEGG]
map05225        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005200        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007276        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009648        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019953        [VIEW IN EMBL-EBI]
GO:0022412        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032504        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044703        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048232        [VIEW IN EMBL-EBI]
GO:0048235        [VIEW IN EMBL-EBI]
GO:0048571        [VIEW IN EMBL-EBI]
GO:0048573        [VIEW IN EMBL-EBI]
GO:0048574        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048609        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0055046        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTACGGTGGTGATGAAGTATCAGCTATAGTCATTGACTTGGGCTCACACACTTGCAAAGTTGGTTATGCCGGCGAGGACGCACCGAAGGCCGTCTTTCCTTCTGTTGTTGGGTCGACGGATCAAATGGACGTTGATGACACTACAAGCAAATGTAAGTTATATGTAGGATCTCAGGCTTTAGGGTTTCGTCGAGACCATATGGAGGTGTTATCACCTTTTAAGGATGGGATCGTTGCTGACTGGGATATGGTTGACAACATATGGAATCATGCTTTCAGAGAGTGTCTATTGATTGACCCAAAGGAGCACCCGATGCTACTTGCAGAACCTTCATCCAACAGTCAACAACAGAGAGAAAGGACAGCAGAGCTTATTTTTGAAAAGTACAATGTTCCTGCATTATTTTTGGCCAAGAATGCTGTTCTAACATCTTTTGCATCAGGACGTGCTACCTCGCTAGTTGTTGATGGTGGTGGAGGATCAACTACAATTGCCCCAGTCCATGATGGTTATGTTCTTCAAAAGGCAGTGGCCTCTTCTCCTATTGGAGGAGAACTTCTTACTGATTGCTTGCTGAAAAGCTTGGAGAGCAAAGGTGTCATGATAAAACCAAGGTACTCTTTCAAAAGAAAGGAAATACAGCTGGGTGTGTTTCAGACGGTGGATCTTGATTTTCCAAGTACAACTGAAAGCTATAGACTCTACTCTCAGAGAGTGATTGCAAGTGATATCAAGGAATGTGTGTGTCGAGCCCCAGATACACCATATGATGAAAGTTCATACTCAAACATTCCAATGACTCCATATGAGCTTCCTGACGGCCAGACAATTGAAATTGGAGCTGATAGATTCAAGATTCCAGATATTCTATTCAATCCATCCTTGATTCAGACAATTCCTGGTATGGATAATTTTGTGGAGATTGCTTCTAGTGCTCGTGGTTTGCCGCAAATGGCTATTGAAAGCATTAATAAGTGTGATGTTGATATCCGAAGAGAACTGTTTAGTAGTATACTGCTTGCTGGTGGAACAGCATCAATGCAACAGTTGAAGGAACGACTTGAGAAAGATTTGCTTGAGGAGTCTCCTCCAGCTGCCAGAGTTAAAGTGCTGGCTAGTGGAAATGCAACTGAAAGGAGATTCAGTGTATGGATAGGAGGTAGTATACTGGCATCTCTTGGTTCATTCCAGCAGACGTGGTTCTCCAAGTCTGAGTATGAAGAGCATGGGGTGTCTTATGTACAAAGAAAATGCCCTTGA
Protein:  
MYGGDEVSAIVIDLGSHTCKVGYAGEDAPKAVFPSVVGSTDQMDVDDTTSKCKLYVGSQALGFRRDHMEVLSPFKDGIVADWDMVDNIWNHAFRECLLIDPKEHPMLLAEPSSNSQQQRERTAELIFEKYNVPALFLAKNAVLTSFASGRATSLVVDGGGGSTTIAPVHDGYVLQKAVASSPIGGELLTDCLLKSLESKGVMIKPRYSFKRKEIQLGVFQTVDLDFPSTTESYRLYSQRVIASDIKECVCRAPDTPYDESSYSNIPMTPYELPDGQTIEIGADRFKIPDILFNPSLIQTIPGMDNFVEIASSARGLPQMAIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPPAARVKVLASGNATERRFSVWIGGSILASLGSFQQTWFSKSEYEEHGVSYVQRKCP